uORF-Tools

Documentation

• uORF-Tools
  • Introduction
  • Program flowchart
  • Directory table
  • Installation
  • Usage
  • Retrieve uORF-Tools
  • Prepare input files
  • Executing the workflow
    • Run the workflow locally
    • Run Snakemake in a cluster environment
    • Report
  • References

Examples

• Example workflow
  • Setup
  • Retrieve and prepare input files
    • Annotation and genome files
    • Fastq files
    • Configuration file and sample sheet
  • Running the workflow
    • Run the workflow locally
    • Run Snakemake in a cluster environment
    • Example: Run Snakemake in a cluster environment
    • Report
  • References